If you’re looking for healthy, moist, naturally sweet muffins, you’re in the right place. These 32 Healthy Applesauce Muffins recipes are perfect for breakfast, snacks, lunchboxes, or even guilt-free desserts. Applesauce replaces oil or butter in most recipes, keeping muffins soft while reducing fat and calories.
Whether you prefer whole wheat, gluten-free, vegan, protein-packed, or kid-friendly muffins, this collection has something for everyone.

Why Applesauce Muffins Are So Healthy
Applesauce muffins are a smart choice because they:
- Reduce added fats like oil and butter
- Add natural sweetness without refined sugar
- Increase moisture without extra calories
- Provide fiber, vitamins, and antioxidants
Using unsweetened applesauce makes these muffins ideal for weight-loss, diabetic-friendly, and heart-healthy diets.
Baking Tips for Perfect Healthy Applesauce Muffins
- Always use unsweetened applesauce
- Don’t overmix the batter
- Use whole grains for extra fiber
- Bake at 350°F (175°C) for even cooking
- Let muffins cool for the best texture
32 Healthy Applesauce Muffin Recipes
1. Classic Healthy Applesauce Muffins

Whole wheat flour, applesauce, honey, cinnamon, eggs, and baking powder.
2. Banana Applesauce Muffins

Mashed banana, applesauce, oats, cinnamon, eggs.
3. Oatmeal Applesauce Muffins

Rolled oats, applesauce, maple syrup, and almond milk.
4. Vegan Applesauce Muffins

Flax eggs, applesauce, plant milk, and coconut sugar.
5. Gluten-Free Applesauce Muffins

Almond flour, oat flour, applesauce, eggs.
6. Applesauce Cinnamon Muffins

Extra cinnamon, nutmeg, applesauce, and honey.
7. Applesauce Carrot Muffins

Grated carrots, applesauce, and whole wheat flour.
8. Applesauce Blueberry Muffins

Fresh blueberries, applesauce, and Greek yogurt.
9. Applesauce Chocolate Chip Muffins

Dark chocolate chips, applesauce, oat flour.
10. Applesauce Protein Muffins

Vanilla protein powder, eggs, applesauce.
11. Applesauce Pumpkin Muffins

Pumpkin purée, applesauce, pumpkin spice.
12. Applesauce Zucchini Muffins

Grated zucchini, applesauce, and whole wheat flour.
13. Applesauce Peanut Butter Muffins

Natural peanut butter, applesauce, eggs.
14. Applesauce Almond Muffins

Almond flour, almond extract, applesauce.
15. Applesauce Raisin Muffins

Raisins, cinnamon, applesauce, and honey.
16. Applesauce Date Muffins

Chopped dates, applesauce, oats.
17. Applesauce Lemon Muffins

Fresh lemon zest, applesauce, yogurt.
18. Applesauce Coconut Muffins

Unsweetened coconut flakes, applesauce.
19. Applesauce Apple Chunk Muffins

Fresh apple cubes, applesauce, and cinnamon.
20. Applesauce Chia Muffins

Chia seeds, applesauce, oat flour.
21. Applesauce Walnut Muffins

Chopped walnuts, applesauce, and maple syrup.
22. Applesauce Orange Muffins

Orange zest, fresh juice, applesauce.
23. Applesauce Yogurt Muffins

Greek yogurt, applesauce, eggs.
24. Applesauce Honey Muffins

Raw honey, applesauce, and whole wheat flour.
25. Applesauce Oat Bran Muffins

Oat bran, applesauce, cinnamon.
26. Applesauce Mocha Muffins

Cocoa powder, coffee, applesauce.
27. Applesauce Berry Muffins

Mixed berries, applesauce, oats.
28. Applesauce Vanilla Muffins

Pure vanilla extract, applesauce, eggs.
29. Applesauce Matcha Muffins

Matcha powder, applesauce, and almond flour.
30. Applesauce Low-Sugar Muffins

Stevia or monk fruit, applesauce.
31. Applesauce Kids-Friendly Muffins

Mini muffins, applesauce, and banana.
32. Applesauce Breakfast Muffins

Oats, nuts, seeds, applesauce.
How to Store Healthy Applesauce Muffins
- Room Temperature: 2 days (airtight container)
- Refrigerator: Up to 7 days
- Freezer: Up to 3 months
Reheat in microwave for 15–20 seconds.
Are Applesauce Muffins Good for Weight Loss?
Yes! Applesauce muffins are:
- Lower in fat
- Naturally sweet
- Filling due to fiber
- Portion-controlled
Choose recipes with whole grains and no refined sugar for best results.
Final Thoughts on 32 Healthy Applesauce Muffins
These 32 Healthy Applesauce Muffins prove that healthy baking can still be delicious, moist, and satisfying. Whether you’re baking for kids, meal prep, or clean eating, applesauce muffins are a must-try.
